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Reports of Biochemistry and Molecular Biology
rbmb.net
Basic Sciences
http://rbmb.net
1
admin
2322-3480
2322-3480
10.61882/rbmb
en
jalali
1398
7
1
gregorian
2019
10
1
8
3
online
1
fulltext
en
Introducing the Best Six Loci in Mycobacterial Interspersed Repetitive Unit-Variable-Number Tandem Repeat (MIRU-VNTR) Typing for Mycobacterium TuberculosisGenotyping
میکروب شناسی
Microbiology
مقالات مروری
Review
<div style="text-align: justify;"><strong>Background: </strong>Tuberculosis (TB) still remains endemic worldwide making epidemiological studies essential to mitigating efforts implicated in identifying its source,controlling, and preventing the spread of dangerous strains amongst humans such as<em> Mycobacterium tuberculosis (Mtb)</em>.<br>
<strong>Methods: </strong>In this study, we sought to determine the 6 Mycobacterial Interspersed Repetitive Unit-Variable-Number Tandem Repeat (MIRU-VNTR) loci with high discriminatory powers for <em>Mtb </em>genotypingas well as the loci with the highest and the lowest discriminatory powers for MIRU-VNTR.To conduct our search, we used several databases such as science direct, Embase (Elsevier), Web of Science, Scopus and Medline via PubMed. Searches were performed using key words including: <em>Mycobacterium tuberculosis,</em> MIRU–VNTR, Allele diversity, Genetic diversity and human patient. Finally, 56 articles were selected after filtering out titles, abstracts and full texts.<br>
<strong>Results: </strong>Loci with high discriminatory powers included MIRU10 and MIRU26, while MIRU2, MIRU20, MIRU24 and ETRD had poor discriminatory powers. According to previous data in the literature, the loci MIRU10, MIRU26, MIRU40, QUB 26, QUB 11b and Mtub21 have high discriminatory powers.<br>
<strong>Conclusions:</strong>Therefore, these loci recommended for genotyping <em>Mtb </em>to save time and cost and to ensure the production of reliable results.</div>
Discriminatory power, Genotyping, MIRU-VNTR, Mycobacterium tuberculosis
335
346
http://rbmb.net/browse.php?a_code=A-10-201-1&slc_lang=en&sid=1
Mahdis
Ghavidel
100319475328460017384
100319475328460017384
Yes
Antimicrobial Resistance Research Center, Mashhad University of Medical Sciences, Mashhad, Iran. & Department of Microbiology and Virology, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
Keyvan
Tadayon
100319475328460017385
100319475328460017385
No
Department of Microbiology, Razi Vaccine and Serum Research Institute (RVSRI), Agricultural Research, Education and ExtensionOrganization (AREEO), Karaj, Iran
Nader
Mosavari
100319475328460017386
100319475328460017386
No
PPD Tuberculin Department, Razi Vaccine and Serum Research Institute, (RVSRI), Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran.
Kimiya
Nourian
100319475328460017387
100319475328460017387
No
Doctor of Veterinary Medicine, Graduate Student of School of Veterinary Medicine, Ferdowsi University of Mashhad, Mashhad,Iran.
Hamid Reza
BahramiTaghanaki
100319475328460017388
100319475328460017388
No
School of Persian Medicine, Mashhad University of Medical Sciences, Mashhad, Iran
Gholam Reza
Mohammadi
100319475328460017389
100319475328460017389
No
Department of Clinical Sciences, School of Veterinary Medicine, Ferdowsi University of Mashhad, Mashhad –Iran.
Mohammad
Rashtibaf
100319475328460017390
100319475328460017390
No
Deputy of Veterinary administration of Khorasan Razavi Province, Mashhad,Iran.
Kiarash
Ghazvini
Ghazvinik@mums.ac.ir
100319475328460017391
100319475328460017391
No
Antimicrobial Resistance Research Center, Mashhad University of Medical Sciences, Mashhad, Iran. & Department of Microbiology and Virology, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.